Category: Visualization

Antonio Sanchez Chinchon builds a shortest-path portrait generator:

In this experiment I apply an heuristic algorithm to solve the TSP to draw a portrait. The idea is pretty simple:

• Load a photo

• Convert it to black and white

• Choose a sample of black points

• Solve the TSP to calculate a route among the points

• Plot the route

Click through for the code.  This is an interesting application of the traveling salesman problem.

Carson Sievert shows off the plotly library:

You might be wondering, “What can plotly offer over other interactive mapping packages such as leaflet, mapview, mapedit, etc?”. One big feature is the linked brushing framework, which works best when linking plotly together with other plotly graphs (i.e., only a subset of brushing features are supported when linking to other crosstalk-compatible htmlwidgets). Another is the ability to leverage the plotly.js API to make efficient updates in shiny apps via plotlyProxy(). Speaking of efficiency, plotly.js keeps on improving the performance of their WebGL-based rendering, so I recommend trying plot_ly() (with toWebGL()) and/or plot_mapbox() if you have lots of graphical elements to render. Also, by having a consistent interface between these various mapping approaches, it’s much quicker and easier to switch from one approach to another when you need to leverage a different set of strengths and weaknesses.

Plotly’s on my list of things I’ll eventually get to one of these days.  H/T R-Bloggers

The folks at Sharp Sight Labs have another nice demo of ggplot2:

You’ve heard me say it a thousand times: to master data science, you need to practice.

You need to “practice small” by practicing individual techniques and functions. But you also need to “practice big” by working on larger projects.

To get some practice, my recommendation is to find reasonably sized datasets online and plot them.

Wikipedia is a nearly-endless source of good datasets. The great thing about Wikipedia is that many of the datasets are small and well contained. They are also fairly clean, with just enough messiness to make them a bit of a challenge.

As a quick example, this week, we’ll plot some economic data.

The code is deceptively easy considering the scope of the problem.

Tyler Rinker digs into ggplot2’s geoms and aesthetics:

I thought it my be fun to use the geoms aesthetics to see if we could cluster aesthetically similar geoms closer together. The heatmap below uses cosine similarity and heirarchical clustering to reorder the matrix that will allow for like geoms to be found closer to one another (note that today I learned from “R for Data Science” about the seriation package [https://cran.r-project.org/web/packages/seriation/index.html] that may make this matrix reordering task much easier).

It’s an interesting analysis of what’s available within ggplot2 and a detailed look at how different geoms fit together with respect to aesthetic options.

I have wrapped up my ggplot2 series, with the last post being on radar charts:

First, we need to install ggradar and load our relevant libraries. Then, I create a quick standardization function which divides our variable by the max value of that variable in the vector. It doesn’t handle niceties like divide by 0, but we won’t have any zero values in our data frames.

The radar_data data frame starts out simple: build up some stats by continent. Then I call the mutate_each_ function to call standardize for each variable in the vars set. mutate_each_is deprecated and I should use something different like mutate_at, but this does work in the current version of ggplot2 at least.

Finally, I call the ggradar() function. This function has a large number of parameters, but the only one you absolutely need is plot.data. I decided to change the sizes because by default, it doesn’t display well at all on Windows.

It was a lot of fun putting this series together. I think the most important part of the series was learning just how easy ggplot2 is once you sit down and think about it in a systemic manner.

Dean Attali announces a new shiny package:

shinyalert uses the sweetalert JavaScript library to create simple and elegant modals in Shiny. Modals can contain text, images, OK/Cancel buttons, an input to get a response from the user, and many more customizable options. A modal can also have a timer to close automatically.

Simply call shinyalert() with the desired arguments, such as a title and text, and a modal will show up. In order to be able to call shinyalert() in a Shiny app, you must first call useShinyalert() anywhere in the app’s UI.

It does look nice.  Check out Dean’s GitHub repo for more information. H/T R-Bloggers