A major update to
ggplot2(version 4.0.0) is expected around mid-to-late July 2025. It brings a significant internal change, replacing most of the S3 backend with the newer S7 object system. While this improves long-term maintainability and extensibility, it may break Bioconductor packages that depend onggplot2, especially those that customise how plots are built or styled. Packages that useggplot2for typical plotting tasks, such as creating plots withggplot()andgeom_*(), are unlikely to be affected.
Click through for notes, tips on what to do, and whether the code you’re using will break with ggplot2 4.0.0. H/T R-Bloggers.
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