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Category: R

Functions to Deal with Object Names in R

Published 2023-11-09 by Kevin Feasel

Maelle Salmon has a sticky note:

Interestingly the docs for setNames() sound as if it were created just for this use case!

“This is a convenience function that sets the names on an object and returns the object. It is most useful at the end of a function definition where one is creating the object to be returned and would prefer not to store it under a name just so the names can be assigned.”

For the opposite operation, removing the names of an object, we can use unname().

Read on for an overview of several of these functions. H/T R-Bloggers.

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Plotting a Cumulative Distribution Function in R

Published 2023-11-09 by Kevin Feasel

Steven Sanderson builds a plot:

Before delving into the world of R programming, let’s first grasp the fundamental concept of a CDF. Imagine a group of students eagerly awaiting their exam results. The CDF for their scores would depict the probability of encountering a student with a score less than or equal to a specific value. For instance, if the CDF indicates a value of 0.7 at 80%, it implies that there’s a 70% chance of finding a student with a score of 80 or lower.

Read on to see how you can calculate this in a dataset and then plot the CDF.

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Converting Data to Time Series in R with TidyDensity

Published 2023-11-08 by Kevin Feasel

Steven Sanderson shows off a new function:

If you’re an R enthusiast like me, you know that data manipulation is at the core of everything we do. The ability to transform your data swiftly and efficiently can make or break your data analysis projects. That’s why I’m thrilled to introduce a game-changing function in TidyDensity, my very own R library. Say hello to convert_to_ts()!

In the world of data analysis, time series data is like a treasure chest of insights waiting to be unlocked. Whether you’re tracking stock prices, monitoring patient data, or analyzing the temperature over the years, having your data in a time series format is a crucial step in the process. With convert_to_ts(), that process just got a whole lot easier.

Click through to see how it works and what you can do with it.

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Print Debugging in R and Rust

Published 2023-11-08 by Kevin Feasel

Jonathan Carroll leaves breadcrumbs:

Print debugging has its place. Sure, it’s not always the best way to debug something, but it can often be the fastest. In this post I describe a useful way to do this in Rust and how we can get similar behaviour in R.

Read on to see how the dbg! macro works in Rust and how to emulate it in R, both by hand and using a library called icecream. H/T R-Bloggers.

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Reasons to Prefer apply() over For Loops in R

Published 2023-11-07 by Kevin Feasel

Hugo Gruson draws some comparisons:

The debate regarding the use of for loops versus the apply() function family (apply(), lapply(), vapply(), etc., along with their purrr counterparts: map(), map2(), map_lgl(), map_chr(), etc.), has been a longstanding one in the R community.

While you may occasionally hear that for loops are slower, this notion has already been debunked in other posts. When utilized correctly, a for loop can achieve performance on par with apply() functions.

However, there are still lesser-known reasons to prefer apply() functions over for loops, which we will explore in this post.

Read on for an important caveat, and then several reasons to prefer apply() (or purrr’s counterparts). H/T R-Bloggers.

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From Probabilities to Odds

Published 2023-11-06 by Kevin Feasel

Bryan Shalloway explains how odds and probabilities intertwine:

However human understanding of odds predates our formal understanding of probability. You can find references to odds dating back to Shakespeare:

Knew that we ventured on such dangerous seas
That if we wrought out life ’twas ten to one;
– Shakespeare’s Henry IV, Part II, 1597

Yet, in most common settings, modern society has largely supplanted odds for probabilities. You can imagine if Shakespeare were writing today the line might end “’twas ten out of eleven.”

Read the whole thing.

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Fitting Distributions to Datasets in R

Published 2023-11-06 by Kevin Feasel

Steven Sanderson tests a distribution fit:

There are two main ways to fit a gamma distribution to a dataset in R:

  1. Maximum likelihood estimation (MLE): This method estimates the parameters of the gamma distribution that are most likely to have produced the observed data.
  2. Method of moments: This method estimates the parameters of the gamma distribution by equating the sample mean and variance to the theoretical mean and variance of the gamma distribution.

Click through to see which technique Steven uses and an example of how it all works.

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Triangular Distributions and R

Published 2023-11-03 by Kevin Feasel

Steven Sanderson unleashes the power of the triangle:

The Triangular Distribution is a continuous probability distribution with a triangular shape, hence the name. It is defined by three parameters: min, max, and mode. These parameters determine the range of values the distribution can take and the most likely value within that range. In mathematical terms, the probability density function (PDF) of the Triangular Distribution is given by:

Read on to see the definition, as well as how you can use the four functions around the Triangular Distribution.

By the way, the best-known case of the Triangular Distribution is combining the results of two fair dice, which gives us a peak at the number 7 (1/6 of the time) for a pair of fair, six-sided dice and moving symmetrically down from there, so p(6) = p(8), p(5) = p(9), and so on.

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Building a Multinomial Distribution in R

Published 2023-11-02 by Kevin Feasel

Steven Sanderson isn’t satisfied with the binomial:

The multinomial distribution is a probability distribution that describes the probability of obtaining a specific number of counts for k different outcomes, when each outcome has a fixed probability of occurring.

In R, we can use the rmultinom() function to simulate random samples from a multinomial distribution, and the dmultinom() function to calculate the probability of a specific outcome.

Click through to see how you can build a multinomial distribution and what the difference is between rmultinom() and dmultinom().

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